CDS

Accession Number TCMCG017C26106
gbkey CDS
Protein Id OMO70427.1
Location join(50398..50463,50787..50872,51927..51984,52065..52166,52418..52711,52794..52881,53023..53150)
GeneID InterPro:IPR003891
Organism Corchorus olitorius
locus_tag COLO4_28605

Protein

Length 273aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019996.1
Definition Initiation factor eIF-4 gamma, MA3 [Corchorus olitorius]
Locus_tag COLO4_28605

EGGNOG-MAPPER Annotation

COG_category T
Description MIF4G domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
KEGG_ko ko:K17583        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005677        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006349        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010214        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017053        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0031507        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070828        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071514        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090568        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000653        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTGCTCAGTTGGGATGGACTTCAGTGCAAAACTTATTGCATCGCTTGCCAAAACTTTTGAGGAGGAATATCTCAAAGAAGACAATCTTTCCTTGCGAAATCTTACTCTTTTGCTATCTTACCTCTGCATCTTTGGGGTTTGCTCAAGGGTGAATGAGTTAAGGGCTTCCTCTGCAGATGGCAATGCAAAAATAAATGGAAAGAGAATGGAATTCATGCTTGAAACAATATGTGATATCAAAAATAATAAGAAAAAGCCCAAGGAAGACACAGTGCAGCACACTCGGATAAAAAAATGGTTACAGAAGTTAAAGGCTGAAGATATTTTATCAAGAGGGCTTAAATGGAGCAAGCTGCTTGATCCTGAAAAGAAGGGCCAGTGGTGGTTGTCTGGGGATATGATCTCTGCAACCGATGACGTCGAAGAGATTGCTAACACAATTGATAAAGAGGCTCGTGAGGCACAAAAAATGCTGGAGCTTGCTGCTGCACAGAGGATGAATACAGATGCCAGGAGAGCAATCTTCTGTGTCATAATGAGTGGGGAAGACTACATCGACACATTTGAGAAGCTTCTAAGGTTGGATTTGCCGGGAAAGCAGGACAGAGATATTATGCGGGTTCTCGTGGAGTGTTGCTTGCAAGAGAAGGTCTTTAACAAGTATTACACTGTCCTTGCTGCCAAGTTGTTTTTGTCTATGGGACAACTTAAAAGAGCTGGATTCAATGCCGCTAATAAGATCGATGCACCTAGCAAAATTCATAGCAGAAATGGTTGCCTCCTTTACTCTTTCCCTCGCAGTCTTAAAAACTGTTGA
Protein:  
MACSVGMDFSAKLIASLAKTFEEEYLKEDNLSLRNLTLLLSYLCIFGVCSRVNELRASSADGNAKINGKRMEFMLETICDIKNNKKKPKEDTVQHTRIKKWLQKLKAEDILSRGLKWSKLLDPEKKGQWWLSGDMISATDDVEEIANTIDKEAREAQKMLELAAAQRMNTDARRAIFCVIMSGEDYIDTFEKLLRLDLPGKQDRDIMRVLVECCLQEKVFNKYYTVLAAKLFLSMGQLKRAGFNAANKIDAPSKIHSRNGCLLYSFPRSLKNC